kractor/Cargo.toml at main · Sam-Sims/kractor · GitHub

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[package]
name = "kractor"
version = "4.0.0"
edition = "2021"
authors = ["Samuel Sims"]
description = "Extract reads from a FASTQ file based on taxonomic classification via Kraken2."
readme = "README.md"
repository = "https://github.com/Sam-Sims/kractor"
license = "MIT"
keywords = ["kraken", "bioinformatics", "taxonomy", "fastq", "metagenomics"]
categories = ["command-line-utilities", "science"]
documentation = "https://docs.rs/crate/kractor/"

# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html

[dependencies]
chrono = "0.4.40"
clap = { version = "4.3.36", features = ["derive"] }
crossbeam = "0.8.4"
env_logger = "0.10.0"
fxhash = "0.2.1"
log = "0.4.27"

niffler = { version = "3.0.0", default-features = false, features = ["gz", "bz2"] }
bzip2 = "0.5.2"
flate2 = { version = "1.1.1", features = ["zlib-rs"] }

noodles = { version = "0.97.0", features = ["fastq", "fasta"] }
serde_json = "1.0.140"
serde = { version = "1.0.219", features = ["derive"] }
color-eyre = "0.6.3"
tempfile = "3.19.1"