diff --git a/src/spatialdata_io/converters/legacy_anndata.py b/src/spatialdata_io/converters/legacy_anndata.py index 3dcf05ee..e98742a0 100644 --- a/src/spatialdata_io/converters/legacy_anndata.py +++ b/src/spatialdata_io/converters/legacy_anndata.py @@ -293,7 +293,10 @@ def from_legacy_anndata(adata: AnnData) -> SpatialData: "tissue_hires_scalef is required when an the hires image is present" ) hires_image = Image2DModel.parse( - hires, dims=("y", "x", "c"), transformations={f"{dataset_id}_downscaled_hires": Identity()} + hires, + dims=("y", "x", "c"), + transformations={f"{dataset_id}_downscaled_hires": Identity()}, + rgb=None, ) images[f"{dataset_id}_hires_image"] = hires_image @@ -306,7 +309,10 @@ def from_legacy_anndata(adata: AnnData) -> SpatialData: "tissue_lowres_scalef is required when an the lowres image is present" ) lowres_image = Image2DModel.parse( - lowres, dims=("y", "x", "c"), transformations={f"{dataset_id}_downscaled_lowres": Identity()} + lowres, + dims=("y", "x", "c"), + transformations={f"{dataset_id}_downscaled_lowres": Identity()}, + rgb=None, ) images[f"{dataset_id}_lowres_image"] = lowres_image