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xcounts: improved how chromosome order inconsistencies are detected DNMTools build (macOS) #68: Pull request #301 opened by andrewdavidsmith
4m 34s xcounts-chroms-without-cpg-sites
xcounts-chroms-without-cpg-sites
4m 34s
src/radmeth/radmeth_model.cpp: protecting against Apple problems with… DNMTools build (macOS) #67: Commit df8d215 pushed by andrewdavidsmith
3m 14s master
master
3m 14s
Updates to radmeth optimization for speed, with minor changes to selectsites, counts and documentation DNMTools build (macOS) #66: Pull request #300 synchronize by andrewdavidsmith
4m 48s radmeth-optimizations
radmeth-optimizations
4m 48s
Updates to radmeth optimization for speed, with minor changes to selectsites, counts and documentation DNMTools build (macOS) #65: Pull request #300 synchronize by andrewdavidsmith
3m 42s radmeth-optimizations
radmeth-optimizations
3m 42s
Updates to radmeth optimization for speed, with minor changes to selectsites, counts and documentation DNMTools build (macOS) #64: Pull request #300 opened by andrewdavidsmith
5m 1s radmeth-optimizations
radmeth-optimizations
5m 1s
data/md5sum.txt: updates for changes to abismal submodule and very mi… DNMTools build (macOS) #63: Commit 71e6b15 pushed by andrewdavidsmith
3m 42s master
master
3m 42s
Updates including fix for roi on counts-nano output and move to strict SAM as assumed in format command DNMTools build (macOS) #62: Pull request #299 opened by andrewdavidsmith
5m 50s uniq-bsrate-stats-accumulation
uniq-bsrate-stats-accumulation
5m 50s
src/analysis/cpgbins.cpp: requiring output file (not stdout) and not … DNMTools build (macOS) #61: Commit 0871706 pushed by andrewdavidsmith
2m 51s master
master
2m 51s
cpgbins: bugfix in unweighted mean calculations DNMTools build (macOS) #60: Pull request #295 opened by andrewdavidsmith
5m 46s cpgbins-bugfix
cpgbins-bugfix
5m 46s
src/radmeth/radmeth.cpp: using my own chisquared function instead of … DNMTools build (macOS) #59: Commit 47a89e8 pushed by andrewdavidsmith
3m 30s master
master
3m 30s
radmeth sample consistency between design and data matrix DNMTools build (macOS) #58: Pull request #294 opened by andrewdavidsmith
3m 56s radmeth-sample-consistency
radmeth-sample-consistency
3m 56s
src/radmeth/radmeth_model.cpp: just updating a constant related to fo… DNMTools build (macOS) #57: Commit 726e69e pushed by andrewdavidsmith
3m 17s master
master
3m 17s
Radmeth verbose model update DNMTools build (macOS) #56: Pull request #293 opened by andrewdavidsmith
3m 17s radmeth-verbose-data-summary-cutoff
radmeth-verbose-data-summary-cutoff
3m 17s
src/radmeth/radmeth.cpp: adding some verbose output to help users int… DNMTools build (macOS) #55: Commit 0a76998 pushed by andrewdavidsmith
3m 19s master
master
3m 19s
Radmeth verbose update DNMTools build (macOS) #54: Pull request #292 opened by andrewdavidsmith
3m 19s radmeth-verbose-update
radmeth-verbose-update
3m 19s
src/amrfinder/amrfinder.cpp: fixed a bug in which the chromosome conv… DNMTools build (macOS) #53: Commit 7e8e6df pushed by andrewdavidsmith
5m 15s master
master
5m 15s
Amrfinder threads bugfix DNMTools build (macOS) #52: Pull request #290 opened by andrewdavidsmith
3m 19s amrfinder-threads-bugfix
amrfinder-threads-bugfix
3m 19s
src/utils/xcounts.cpp: adding better error reporting DNMTools build (macOS) #51: Commit 8bd6d51 pushed by andrewdavidsmith
3m 13s master
master
3m 13s
Better error reporting for xcounts DNMTools build (macOS) #50: Pull request #289 opened by andrewdavidsmith
4m 36s xcounts-better-error-report
xcounts-better-error-report
4m 36s
src/radmeth/radmeth.cpp: fixing a bug in which the estimated values f… DNMTools build (macOS) #49: Commit 52bc666 pushed by andrewdavidsmith
5m 32s master
master
5m 32s
Bugfix for radmeth when printing estimated methylation levels by group DNMTools build (macOS) #48: Pull request #288 opened by andrewdavidsmith
2m 52s radmeth-bugfix
radmeth-bugfix
2m 52s
src/radmeth/radmeth_optimize.cpp: not throwing an exception when the … DNMTools build (macOS) #47: Commit 5c4a3c3 pushed by andrewdavidsmith
4m 1s master
master
4m 1s
Adding estimated group methylation levels and dispersion to output DNMTools build (macOS) #46: Pull request #287 opened by andrewdavidsmith
5m 49s radmeth-output-format
radmeth-output-format
5m 49s
src/abismal: updating submodule for a nested submodule DNMTools build (macOS) #45: Commit b93cb9f pushed by andrewdavidsmith
3m 48s master
master
3m 48s
Adding autocorr command DNMTools build (macOS) #44: Pull request #286 synchronize by andrewdavidsmith
3m 27s autocorr
autocorr
3m 27s