diff --git a/data/workflow/databases.sh b/data/workflow/databases.sh index d932ac91d..90f9b3c56 100644 --- a/data/workflow/databases.sh +++ b/data/workflow/databases.sh @@ -67,7 +67,7 @@ downloadExtractBlastTars() { META_JSON="$1" OUTPUT="$2" ( downloadFile "${META_JSON}" "${OUTPUT}/version" ) - grep -F ".tar.gz" "${OUTPUT}/version" | cut -f2 -d\" | sed 's|^ftp:|https:|g' > "${OUTPUT}/tar_files.txt" + grep -F ".tar.gz" "${OUTPUT}/version" | cut -f2 -d\" | sed 's|^ftp:|https:|g' | sed 's|/export/home/blastadm/clustered_nr_ftp/db/||' > "${OUTPUT}/tar_files.txt" while IFS= read -r URL; do FILENAME=$(basename "${URL}") ( downloadFile "${URL}" "${OUTPUT}/${FILENAME}" )