Added logic to FIBContext for Analyser to register FIB atlas images and associated metadata#758

Merged

tieneupin merged 13 commits intomainfrom

register-fib-atlas

Mar 16, 2026

Commits on Mar 12, 2026

Added logic to trigger FIB context and optimised logic for triggering CLEM context
tieneupin
committed
Added placeholder 'elif' blocks for the Maps and Meteor FIB datasets
tieneupin
committed
Added example FIB files to the Analyser test
tieneupin
committed

Commits on Mar 13, 2026

Added logic to parse FIB Maps metadata and images and trigger workflow (to be determine) once both are accounted for
tieneupin
committed
Added tests and placeholder tests for the FIBContext class
tieneupin
committed
Use regex to extract number from FIB file name; add logic to include stage slot number and image number for FIB Maps workflow
tieneupin
committed
Added metadata informaion about 'Status' to simulated FIB Maps metadata
tieneupin
committed
Updated type hints
tieneupin
committed
Added logic to determine destination path for files in FIB workflow
tieneupin
committed
Updated tests
tieneupin
committed
Added placeholder tests for other FIBContext helper functions, added test for '_number_from_name', and fixed broken regex search
tieneupin
committed
Added unit test for '_get_source' helper function
tieneupin
committed

Commits on Mar 14, 2026

Added unit test for '_file_transferred_to' helper function
tieneupin
committed