academic/bowtie2: Update to version 2.5.5#14928
Closed
brobr wants to merge 1 commit intoSlackBuildsOrg:willysrfrom
Closed
academic/bowtie2: Update to version 2.5.5#14928brobr wants to merge 1 commit intoSlackBuildsOrg:willysrfrom
brobr wants to merge 1 commit intoSlackBuildsOrg:willysrfrom
Conversation
reverse dependencies - academic/bowtie2
|
✅ sbolint - academic/bowtie2 ✅ |
Member
|
@sbo-bot: build academic/bowtie2 |
buildpkg i586 academic/bowtie2Snipped Build LogDetails |
buildpkg x86_64 academic/bowtie2Snipped Build FailureDetails |
Member
|
@sbo-bot: build x86_64 academic/bowtie2 |
Contributor
Author
|
@#14928 (comment) |
Member
|
@brobr SBo tracks stable, not current |
buildpkg x86_64 academic/bowtie2Snipped Build FailureDetails |
Member
|
@brobr this still failed |
Contributor
Author
|
Yes, also fails in my Slack-15.0 virtual box environment: Compiling the old version, bowtie2-2.5.4 gave no problem here. Being a minor version upgrade I did not tested this completely, sorry. Okay found this Bowtie2-2.5.4: CMakeLists.txt: Bowtie2-2.5.5: CMakeLists.txt: |
Member
|
try use cmake-opt ? |
Contributor
Author
|
Thanks Willy, but the cmake differences could be a red herring (I found the differences in the Cmakelists first, closer to the top; I should have looked better to the error:). The bowtie2 script uses This because also the Please ignore old question:Searching for reverse depencies on slackbuilds.org gave me some examples (like https://slackbuilds.org/slackbuilds/15.0/gis/qgis/qgis.SlackBuild) PS: I deleted previous message |
Contributor
Author
|
I asked the developer here: BenLangmead/bowtie2#522 |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
No description provided.