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Pull requests: dpeerlab/segger

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Pull requests list

Add segger export for scverse-compatible output
#70 opened Jun 24, 2026 by EliHei2 Collaborator Loading…
1
2
Feat/export cli
#66 opened Jun 11, 2026 by EliHei2 Collaborator Loading…
fix(io): platform-detection helpers + tiebreak (shared base)
#64 opened Jun 1, 2026 by EliHei2 Collaborator Loading…
1
fix(io): robustly read NanoString CosMX datasets
#63 opened Jun 1, 2026 by EliHei2 Collaborator Loading…
@Tobiaspk
fix(geometry): retry point-in-polygon with finer batching on GPU OOM
#62 opened Jun 1, 2026 by EliHei2 Collaborator Loading…
@Tobiaspk
1
fix(io): read Vizgen MERSCOPE datasets
#60 opened Jun 1, 2026 by EliHei2 Collaborator Loading…
@Tobiaspk
fix(writer): guard per-gene thresholding against degenerate similarities
#59 opened Jun 1, 2026 by EliHei2 Collaborator Loading…
1
fix(model): guard prediction against empty tiles
#58 opened Jun 1, 2026 by EliHei2 Collaborator Loading…
@Tobiaspk @andrewmoorman
1
feat(io): optional z-coordinate passthrough (include_z, default False)
#57 opened Jun 1, 2026 by EliHei2 Collaborator Loading…
@Tobiaspk
2
fix(io): make the Xenium QV threshold configurable (default 20)
#55 opened Jun 1, 2026 by EliHei2 Collaborator Loading…
1
[main] Integration/peerlab
#51 opened May 27, 2026 by Tobiaspk Collaborator Loading…
[main] Feature: SpatialData I/O support
#37 opened May 7, 2026 by enric-bazz Loading…
1
[v2-incremental] Fix regex filter and table parsing on spatialdata I/O
#29 opened Mar 20, 2026 by enric-bazz Loading…
[main] Feature/save cell mask
#5 opened Jan 12, 2026 by mossishahi Contributor Loading…
1
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