add remote support#971

Draft

melonora wants to merge 66 commits intomainfrom

Commits on Jan 24, 2025

Commits on Jan 31, 2025

Commits on Feb 1, 2025

Commits on Mar 17, 2025

Commits on Aug 19, 2025

add basic support and remote SpatialData tests

berombau
authored and
melonora
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot]
authored and
melonora
committed
fix pre-commit

LucaMarconato
authored and
melonora
committed
Revert "Update pyproject.toml"

LucaMarconato
authored and
melonora
committed
fix

LucaMarconato
authored and
melonora
committed
uploading sdata to local s3 storage

LucaMarconato
authored and
melonora
committed
add _open_zarr_store

berombau
authored and
melonora
committed
revert changing write function signature

authored and
melonora
committed
update _open_zarr_store with StoreLike

berombau
authored and
melonora
committed
read image element from base store

berombau
authored and
melonora
committed
clean up remote mock tests, focus only on reading raster elements

berombau
authored and
melonora
committed
improve remote http test, add alternative

berombau
authored and
melonora
committed
add support for consolidated metadata store in util function, add _create_upath function

berombau
authored and
melonora
committed
allow for groups as store input

berombau
authored and
melonora
committed
handle consolidated metadata with upath

berombau
authored and
melonora
committed
split remote reading tests between http and http with consolidated metadata

berombau
authored and
melonora
committed
remove f_store_path, support remote raster types fully and keep local support for other elements

berombau
authored and
melonora
committed
Fix metadata_key bug now that store is not always FSStore. Add extra comments.

berombau
authored and
melonora
committed
add mypy fixes

berombau
authored and
melonora
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot]
authored and
melonora
committed
Fix linting errors

ap--
authored and
melonora
committed
fixed majority of tests

ap--
authored and
melonora
committed
spatialdata._io._utils: _open_zarr_store has to set dimension_separator to emulate previous ome_zarr.io.parse_url

ap--
authored and
melonora
committed
stay in sync with ome zarr format

ap--
authored and
melonora
committed
spatialdata._io.io_raster: support remote stores

ap--
authored and
melonora
committed
prevent crashing tests on 3.10

ap--
authored and
melonora
committed

Commits on Aug 20, 2025

Commits on Aug 22, 2025

add remote write support + cleanup (#973)
melonora
authored