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update stan to be compatible with Eigen 5.0.1 #3371

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Merged
SteveBronder merged 2 commits into from
Feb 11, 2026
+7 −7
Merged

update stan to be compatible with Eigen 5.0.1 #3371

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8bbd44a
update stan to be compatible with Eigen 5.0.1
SteveBronder Feb 6, 2026
0f80d7d
update to use Eigen::indexing instead of Eigen::placeholders
SteveBronder Feb 10, 2026
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4 changes: 2 additions & 2 deletions src/stan/model/indexing/rvalue.hpp
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Original file line number Diff line number Diff line change
Expand Up @@ -280,7 +280,7 @@ inline auto rvalue(EigMat&& x, const char* name, MultiIndex&& idx) {
[](auto&& x_ref, auto&& idx_inner) {
using vec_map = Eigen::Map<const Eigen::Array<int, -1, 1>>;
return x_ref((vec_map(idx_inner.ns_.data(), idx_inner.ns_.size()) - 1),
Eigen::all);
Eigen::indexing::all);
},
stan::math::to_ref(std::forward<EigMat>(x)),
std::forward<MultiIndex>(idx));
Expand Down Expand Up @@ -591,7 +591,7 @@ inline auto rvalue(EigMat&& x, const char* name, Idx&& row_idx,
[name](auto&& x_ref, auto&& row_idx_inner, auto&& col_idx_inner) {
using vec_map = Eigen::Map<const Eigen::Array<int, -1, 1>>;
return rvalue(
x_ref(Eigen::all,
x_ref(Eigen::indexing::all,
(vec_map(col_idx_inner.ns_.data(), col_idx_inner.ns_.size())
- 1)),
name, std::forward<decltype(row_idx_inner)>(row_idx_inner));
Expand Down
4 changes: 2 additions & 2 deletions src/test/unit/services/pathfinder/eight_schools_test.cpp
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Expand Up @@ -124,7 +124,7 @@ TEST_F(ServicesPathfinderEightSchools, multi) {
EXPECT_GE(param_vals.col(2)(i), 0);
EXPECT_LE(param_vals.col(2)(i), num_paths);
}
auto param_tmp = param_vals(Eigen::all, param_indices);
auto param_tmp = param_vals(Eigen::indexing::all, param_indices);
auto mean_sd_pair = stan::test::get_mean_sd(param_tmp);
auto&& mean_vals = mean_sd_pair.first;
auto&& sd_vals = mean_sd_pair.second;
Expand Down Expand Up @@ -448,7 +448,7 @@ TEST_F(ServicesPathfinderEightSchools, single) {
for (auto&& x_i : param_vals.col(2)) {
EXPECT_EQ(x_i, stride_id);
}
auto param_tmp = param_vals(Eigen::all, param_indices);
auto param_tmp = param_vals(Eigen::indexing::all, param_indices);
auto mean_sd_pair = stan::test::get_mean_sd(param_tmp);
auto&& mean_vals = mean_sd_pair.first;
auto&& sd_vals = mean_sd_pair.second;
Expand Down
6 changes: 3 additions & 3 deletions src/test/unit/services/pathfinder/normal_glm_test.cpp
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Expand Up @@ -101,7 +101,7 @@ TEST_F(ServicesPathfinderGLM, single) {
EXPECT_EQ(x_i, stride_id);
}

auto param_tmp = param_vals(Eigen::all, param_indices);
auto param_tmp = param_vals(Eigen::indexing::all, param_indices);
auto mean_sd_pair = stan::test::get_mean_sd(param_tmp);
auto&& mean_vals = mean_sd_pair.first;
auto&& sd_vals = mean_sd_pair.second;
Expand Down Expand Up @@ -240,7 +240,7 @@ TEST_F(ServicesPathfinderGLM, multi_null_unique) {
EXPECT_GE(param_vals.col(2)(i), 0);
EXPECT_LE(param_vals.col(2)(i), num_paths);
}
auto param_tmp = param_vals(Eigen::all, param_indices);
auto param_tmp = param_vals(Eigen::indexing::all, param_indices);
auto mean_sd_pair = stan::test::get_mean_sd(param_tmp);
auto&& mean_vals = mean_sd_pair.first;
auto&& sd_vals = mean_sd_pair.second;
Expand Down Expand Up @@ -318,7 +318,7 @@ TEST_F(ServicesPathfinderGLM, multi) {
EXPECT_GE(param_vals.col(2)(i), 0);
EXPECT_LE(param_vals.col(2)(i), num_paths);
}
auto param_tmp = param_vals(Eigen::all, param_indices);
auto param_tmp = param_vals(Eigen::indexing::all, param_indices);
auto mean_sd_pair = stan::test::get_mean_sd(param_tmp);
auto&& mean_vals = mean_sd_pair.first;
auto&& sd_vals = mean_sd_pair.second;
Expand Down